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REGA HIV-1 Subtyping Tool - Version 1.0



 Access and download the HIV-1 Subtyping tool:
Mirrors:
(We suggest the users to access the mirror that it is near their geographical location).

Africa: BioAfrica (South Africa).
Europe: REGA institute (Belgium), Oxford (UK - internal use).
Americas: Stanford HIV Drug Resistance db (USA), FioCruz (Brazil).
Tutorials:
  • Decision trees for the REGA HIV-1 subtyping tool.
  • Subtyping process: Methods and Alignment Information.
  • Adapting the tool to subtype other pathogens and to use different alignments. 
  • Tutorial on Interpretation of the Subtype Tool Report.
  • Example sequences for use in the 11th International Workshop for Virus Evolution and Molecular Epidemiology. 
Developed in cooperation with the Evolutionary group at University of Oxford, UK., the HIV-1 Pathogenesis and Immunotherapeutics Program at University of Pretoria, South Africa, and the REGA Institute at the Katholieke Universiteit Leuven, Leuven, Belgium.
Funded by the Flanders Bilateral Cooperation Program and the Wellcome Trust (grant # 061238 ). 

The HIV-1 automated subtype tool  is maintained by: Tulio de Oliveira, 
Please report problems and/or suggestions to  tulio.deoliveira@zoo.ox.ac.uk

Revised 16 of June 2005 - Copyright @ BioAfrica